Showing posts with label science literacy. Show all posts
Showing posts with label science literacy. Show all posts

Data Visualization: 200 Years of Health and Wealth

Wednesday, December 15, 2010 at 10:48 PM Bookmark and Share
This video is super awesome!  It's part of BBC 4's program The Joy of Stats and you can learn a little more about the data here or play with it using this web app on http://www.gapminder.org/. Now don't you wish you could do that with data?


The reason I wanted to share this video (beyond the fact that it's so amazingly awesome) is to let you in on a little secret... are you ready? Here it comes...
Data visualization is easy, and anyone with a computer can do it!
Seriously, it is not that hard! YOU can make cool little wobbling bubble graphs just like in the video! Aren't you excited to learn how?! Yeah? Fantastic!

Now that you're all psyched to visualize some data, I should mention that I am being a bit misleading here... because it does require a bit of computer know-how, and sometimes (ok, almost always) takes a bit of tinkering with the data to find the best ways of boiling down to just the relevant information. But frankly, these things aren't all that hard to learn and aren't always necessary if we're just poking around to get a feel for the data, so none of these words of caution should give you much pause.  Add to that the fact you can always hit up the internet for examples to download and use study and learn from and many of these obstacles are reduced to mere speed bumps.  If you've got a computer, we can get it to plot some data.

Figure 1. Tourist hot spots based on Flickr data. #1 of flowingdata's Top Ten Data Visualization Projects of 2010.

So here's the deal... there are some really cool data available from http://www.gapminder.org/, and I'm going to have a little free time these next few weeks in between birding trips, visiting family and friends, and doing thesis work.  Assuming that free time stays free, I'm going to walk through an example or two of plotting some of this data in R.  If you'd like to follow along, you'll need to download and install R on your computer, and if you don't already have software that can open excel spreadsheets, you'll also want to install something (free) like OpenOffice.

Sound good? Excellent!  Feel free to share any questions or suggestions in the comments section below.  Now hurry along and go install R!

U.S. Math & Science Students Need Our Help

Wednesday, November 17, 2010 at 8:37 PM Bookmark and Share
The U.S. ranks very low in math and science compared to other nations -- 35th in Math and 29th in Science. That's embarrassingly low, a threat to the future of our nation's economy, and most importantly it's a problem we can solve. So why are we so far behind?

While digging through TIMMS results can be thought provoking, you must, must, must watch this video which provides a sobering comparison between US student attitudes towards math and science with those of their counterparts from some of the top ranked countries. So click here if you can spare 3 minutes -- it's worth it! The video was produced as part of the Connect A Million Minds (CAMM) campaign, "Time Warner Cable’s philanthropic commitment to connect youth to ideas, people and opportunities that will inspire them to become the problem solvers of tomorrow."


You can see more CAMM videos here.  For more information, look here, here, here and here.

[Hat tip to DNLee]

The Power of Data Visualization & Comparison

Tuesday, November 2, 2010 at 8:22 PM Bookmark and Share

David McCandless: The beauty of data visualization (TED Talk)

Computational statistics and computer programming abilities are -- and will continue to be -- valuable skills in the job market (and in the sciences).  If I could offer any career advice to students, it is to work hard to learn these two things well!

Should Scientists, Journalists "Take Sides"?

Thursday, September 23, 2010 at 6:11 PM Bookmark and Share
Ed Yong has a great post up on his (excellent) blog Not Exactly Rocket Science, which I hope you'll read. There, he writes (emphasis mine):
It is clear to me that science journalists should not take the side of any particular scientist, of a specific idea, or even of science itself. But it is imperative that we take the side of truth. That may seem obvious but many of the strictures of traditional journalism are incompatible with even that simple goal.

You can read more details on the topic of objectivity, science journalism, and "taking sides" in his post, here.

Texas Governor Perry Equates Creationism, Intelligent Design

Tuesday, September 14, 2010 at 5:47 PM Bookmark and Share
It's shameful that a sitting Governor would so blatantly advocate for religious pseudoscience to be taught as real science to public school students.  But I suppose there is silver lining to the story: at least Texas Gov. Rick Perry recognizes intelligent design as creationism:
Explain where you stand on evolution-creationism being taught in school.

I am a firm believer in intelligent design as a matter of faith and intellect, and I believe it should be presented in schools alongside the theories of evolution. The State Board of Education has been charged with the task of adopting curriculum requirements for Texas public schools and recently adopted guidelines that call for the examination of all sides of a scientific theory, which will encourage critical thinking in our students, an essential learning skill.
He's right. While some of his fellow Texans have previously tried to pretend otherwise, intelligent design is a form of monotheistic creationism.

As for that "teach the alternatives" nonsense - maybe he'd also be keen to start teaching about the Church of the Flying Spaghetti Monster alongside Christianity in Texas history and religion classes?

[Hat tip to PZ]

More on what Fodor and Piattelli-Palmarini Got Wrong

Friday, July 30, 2010 at 12:12 AM Bookmark and Share
Jerry Fodor and Massimo Piattelli-Palmarini have received quite a bit of criticism since the publication of their book What Darwin Got Wrong, which attempts to argue that evolution by natural selection is basically nonsense.  The consensus seems to be that Fodor and Piattelli-Palmarini don't understand modern evolutionary theory, and that they're plainly wrong. However, in case you think they might be onto something you should check out this July 2010 critique of their book, which also takes them to task for getting it wrong.  The review is written by Harvard philosopher Peter Godfrey-Smith. You should of course click over to the review and give it a good read, but I thought I'd comment here on a few highlights.

Peter begins by recalling a young Noam Chomsky's scathing book review of B. F. Skinner's 1957 book Verbal Behavior, which seems to have rightfully blown those ideas right off the map.  He suggests there is a parallel here, to what Fodor and Piattelli-Palmarini seem to have attempted with their book... except this time it's they who have it wrong.
... A young linguist, Noam Chomsky, published a review of Verbal Behaviour... It was perhaps the most devastating book review ever written.

Chomsky argued that Skinner’s theoretical vocabulary could be applied to human linguistic behaviour only in an empty, post hoc way. He also thought that Skinner’s behaviourism had a simple architectural flaw: it held that external factors – especially experiences of reinforcement – were of ‘overwhelming importance’ in the explanation of behaviour. Hardly any role was given to what Chomsky referred to simply as ‘the internal structure of the organism’. It is unusual to do serious damage to a scientific research programme with a set of general arguments – not by citing experimental or mathematical results, but by looking at the basic ideas and revealing a crack in the foundations. Though the impact of the review itself is sometimes exaggerated, this is the effect Chomsky had on the behaviourist study of humans.

Jerry Fodor now hopes to do something similar to Darwinism in biology. Fodor has been making sceptical remarks about Darwinian ideas for decades. Three years ago he wrote a direct attack on Darwinian evolutionary theory in the LRB, and he has now published What Darwin Got Wrong, along with Massimo Piattelli-Palmarini. Fodor and Piattelli-Palmarini believe that they can replicate Chomsky’s demolition job on Skinner because ‘Skinner’s account of learning and Darwin’s account of evolution are identical in all but name.’ As we shall see, ‘identical’ is quite a stretch, but there is a real analogy.
Peter then recounts the criticism others have made of Fodor and Piattelli-Palmarini, specifically the argument that natural selection needs to be an 'intensional process' that can distinguish between 'co-extensive' properties of organisms (translation: natural selection allows correlated traits to piggy back advantageous traits, and this somehow implies natural selection doesn't work...)  Now, while there's a more to the book than that (again, see the review for details) this argument sounds so blatantly wrong that I wonder if I'm even understanding it correctly!  I mean really?  Correlated neutral traits are the big showstopper for natural selection? Sadly, I don't think I'm wrong. This really appears to be part of their argument!  If that's true, then the book What Darwin Got Wrong should be given the more appropriate title, What Fodor and Piattelli-Palmarini Got Wrong.

Now, I'm not just making this interpretation up... and neither is Peter Godfrey-Smith.  Here's what F&P-P had to say in their response to an earlier criticism by Block and Kitcher (links below, emphasis mine):
For example, suppose random variation produces a trait that tends to make its bearers invisible to their predators. Then, all else equal, the predators gobble up the creatures that don’t have it, and the relative frequency of the trait in the population increases from generation to generation. To repeat, we haven’t the slightest doubt that this is the process that Darwin called natural selection and that Darwinists have always believed in some or other version. In fact, it sounds pretty good. It sounds like it ought to work.

But it doesn’t. A way to see that it doesn’t (not by any means the only way) is to consider confounded (linked) phenotypic traits, one but not the other of which is fitness-enhancing. Both traits are then correlated with fitness, so both should count as adaptations according to the formulation of natural selection given above. But only one of them is a cause of selection, so only one of them is an adaptation, and, though both are selected, only one is selected-for. Thus the free-rider problem. Prima facie, free riding is a counterexample to natural selection.
Massive sadness... They botched it.  Prima facie, Fodor and Piattelli-Palmarini are simply confused about modern evolutionary biology (which is forgivable) and publicly wielding some philosophical sledge hammers at it, creating some confusion in their wake (this fact is way less forgivable, in my opinion).

Peter I think sums it up nicely when he writes...
Fodor and Piattelli-Palmarini criticise the tendency to talk of selection as if it were an agent. They are right that this is often misleading, but they seem to be making a similar mistake when they treat it as something over and above the ordinary facts of life, death and reproduction.
After all, recalling how natural selection works in a population, there really isn't much more to it that "life, death and reproduction." Just combine (1) some variation that is (2) heritable with (3) those variants achieving differential reproductive success.  Let that process run for a few generations, and blammo - evolution happens. The distribution of variation in the population changes and the rest is (natural) history. Darwin nailed it, over a century worth of scientific progress has confirmed it, yet unfortunately it appears Fodor and Piattelli-Palmarini simply got it wrong.

But... perhaps one day they'll recognize their mistake, do the right thing, and admit they were wrong?  After all, they themselves say in their reply to Block and Kitcher (again, emphasis mine)...
Everybody makes mistakes. Even biologists do; even lots of biologists assembled together do; even great biologists like Darwin do...
Yes, gentlemen, so do very respectable cognitive scientists and philosophers, even those not unlike yourselves.

Related Links

  1. Misunderstanding Darwin: Darwin's Secular Critics Get It Wrong | Great critique by Block and Kitcher.
  2. "Misunderstanding Darwin" An Exchange. | Dialogue where Fodor and Piattelli-Palmarini Respond

How to disprove evolution

Thursday, July 29, 2010 at 12:30 AM Bookmark and Share
... according to a Texan.


Oh, right, I should of course mention that this particular Texan is a wickedly sharp scientist and creator of some hugely popular YouTube videos on creationism, evolution and science education. Nothing wrong with knowing how to disprove a scientific theory - after all, that's how science works!

Now head on over and check out AronRa's youtube channel for more of his great videos.

Which Came First: The Chicken or the Egg?

Friday, July 16, 2010 at 12:52 AM Bookmark and Share
I was surprised to hear my local news anchor announce that scientists have "finally" answered the question of which came first: the chicken or the egg.  The story is making rounds in the news - for example here, here, here, and here - but they're getting it wrong.

Three words: Bad. Science. Journalism.

Now, before you think I'm going off the deep end here - I'm not the only one who thinks this is crappy science journalism, and I try to keep things in perspective...



Back to our question. Ignoring the original causality dilemma, didn't we clear this up a century or two ago?  The egg came first (yes, even the shelled egg) and it arrived on the scene a couple hundred million years earlier, so it isn't even close!

Despite the horrible news coverage, the real story behind the bad headline is interesting. In short, molecular modeling work suggests the role of a certain protein (ovocleidin-17) is to catalyze the deposition of calcium during the formation of the egg shell in chickens.  This has been it's suspected role for a few years now, but it's great to have another line of evidence that also suggests this protein's function, plus it gives us a better understanding of how eggs are produced.

The news story does has a silver lining. After covering it, my local Fox news anchors went on to mention that the authors of the research did point out that birds evolved from dinosaurs, and that perhaps we should rephrase the question in terms of dinosaurs versus dinosaur eggs.  If you missed that, let me reiterate: my local Fox News anchors pointed out that birds evolved from dinosaurs!  

Given the results of a recent poll, that's a welcome statement on the evening news.
In the United States, almost half of respondents (47%) believe that God created human beings in their present form within the last 10,000 years, while one-third (35%) think human beings evolved from less advanced life forms over millions of years.

Half of people in the Midwest (49%) and the South (51%) agree with creationism, while those in the Northeast are more likely to side with evolution (43%).
These are similar to previous polling results from Gallup on Evolution, Creationism and Intelligent Design.

Related Links:

  1. Bad science journalism the fault of chickens or eggs?  | Thoughtomics by Lucas Brouwers
  2. Freeman C. L., Harding J. H., Quigley D., Rodger P. M. 2010. Structural Control of Crystal Nuclei by an Eggshell Protein. Angewandte Chemie International Ed. 49(30) doi: 10.1002/anie.201000679

Homeopathic Infertility Treatment

Tuesday, July 13, 2010 at 3:58 PM Bookmark and Share

[Thanks to Mike for the link to xkcd]

Elements of Math, by Steven Strogatz

Thursday, July 8, 2010 at 12:19 AM Bookmark and Share
Courtesy of the editors at the New York Times Opinionator blog:
Professor Strogatz’s 15-part series on mathematics, which ran from late January through early May, is available on the “Steven Strogatz on the Elements of Math” page.
Go check it out! Strogatz is an excellent speaker and writer, and any minute spent reading his writing is a minute very well spent.

The Great Textbook Wars

Wednesday, June 9, 2010 at 4:57 PM Bookmark and Share
Texas (among other states) has made news in recent years whenever fundamentalist Christians wage campaigns to replace the content of  public school text books wherever they conflict with their particular brand of religious dogma.  Because states like Texas are large consumers of school books, those changes end up affecting other states and thus affecting the rest of the nation.

In light of that old aphorism "those who cannot remember the past are condemned to repeat it," you should check out The Great Texbook Wars -- an American RadioWorks documentary on the history of cultural and religious battles over what should and should not be taught in public schools.

While returning from a conference last week, I heard a local NPR station advertise The Great Texbook Wars for this coming Friday, June 9th.  You can check your local NPR listings to see if and when it's airing in your neck of the woods.

In the mean time, click on over to the website and check out the three short essays and many great photos available there.  It looks like a great program, one not to be missed!

Neil DeGrasse Tyson on the value of scientific literacy

Sunday, June 6, 2010 at 1:14 PM Bookmark and Share
I've often heard students question the day-to-day value of science: "Yeah, but how is knowing <insert scientific claim> going to impact my life if I'm not a scientist?" In my experience, these individuals almost always confuse a particular scientific claim with the scientific process that lead to acceptance of that claim.

Often times they're right - some scientific facts are simply useless for most people - but any decent response to their question should always bring them back to science as a process, not a fact. 
"Science literacy empowers you to know when someone else is just basically full of it. Because you understand... how the world works and what the limitations are, then you can judge whether someone is trying to exploit your scientific ignorance."
In the clip below, American astrophysicist (and kick-ass public speaker) Neil DeGrasse Tyson explains.

The Science of Denying Science

Sunday, May 30, 2010 at 12:20 AM Bookmark and Share
Have you ever wondered how people can rationalize away a scientific claim when it conflicts with other beliefs?  Or why being anti-evolution also seems to up the odds being anti-vaccine or a climate change denialist??

Then you should go check out When Science Clashes with Beliefs? Make science impotent, by John Timmer.

[Hat Tip to PZM]

Science, Innovation and the BP Oil Spill

Sunday, May 23, 2010 at 1:19 AM Bookmark and Share
Bill Nye (yup, the Science Guy) critiques suggestions to clean up the ongoing BP oil spill.  Decent commentary on some challenges posed by the spill, and the fundamental importance of scientific and technological expertise the effort will require.

Happy Earth Day!

Thursday, April 22, 2010 at 2:56 AM Bookmark and Share
An appreciation for nature and science is all about knowing what's out there in the world, and the ways of discovering how it all works.  To celebrate the 40th Anniversary of Earth Day a valuable gift you can share with others (especially children) is the simple ability to observe.

In fact, if I had only one bit of advice on encouraging an interest in the natural world, it would be this: foster keen observation and encourage curiosity.

If you're thinking "... but, how?" well, you're in luck: getting started is easier than you think!

First, get outside and into close contact with the natural world.  This should involve dirt, maybe a little mud, plants, insects, rocks, untreated water, and a distinct lack of paved surfaces. Fortunately for most of us, this is as easy as heading into the back yard or to a nearby park or natural area.

Second, bring along tools that enhance the senses: magnifying lenses, binoculars, headlamps, telescopes, mirrors -- whatever you've got. Anything that broadens what one can observe with their own senses is going to enhance the experience.  Additional items to bring include things like nets and containers for temporarily collecting various critters. These are great items to bring along, but must be used responsibly and in accord with any local laws that might apply. 

Third, don't just passively observe, but be active about it!  Encourage interaction (safely, of course) and the active documentation of the experience. Passive forms of documentation (e.g. photographs) are easy, but do little to make one think about the experience or to get one to pay attention to details.  By "active documentation" I mean bring a notebook and measure things, count things, weigh things, describe things, identify things, and write it all down.

One of the very best ways I know to develop keen observational skills is to sketch, draw or otherwise describe subjects in a journal or field notebook.  You'd be amazed at the details you need to notice when trying to draw part of an insect under a magnifying lens, or a bird at your local park.  Later, encourage the use of field guides, books and online references to answer questions inspired by these experiences and notes from the excursion.

Whether you're a parent, teacher, part-time sitter, or just a friendly neighbor -- try and set aside some time today to teach someone something about our planet. 

Michael Specter on the Dangers of Science Denial

Software for Science & Math: R and Maxima (part I)

Sunday, April 11, 2010 at 7:11 PM Bookmark and Share
In the coming months, I plan to write a series of posts reviewing "must-know" mathematics everyone should be familiar with: important concepts from Calculus, Probability and Statistics.  Here I begin by introducing some free software you can use to follow along, or use for your own computational tasks. In future posts, I'll encourage a little hands-on learning of these applications by providing code and other information so you can recreate my figures and results. 

Science has emerged as humankind's most effective way of understanding reality.  The success of the scientific method is largely a product of two key components: (1) a strong reliance on empirical data, and (2) a precise and powerful theoretical framework to properly formulate hypotheses, make predictions about experimental outcomes, etc.

Skipping over the importance of data (for now), I'd like to introduce some computational tools that you might consider installing on your computer. The applications are the computing platform known simply as R, and the software for doing symbolic manipulations (e.g. algebra) known as Maxima. I should mention this software isn't just for goofing around and writing blog posts -- these applications can be used to do research-level mathematical, statistical and numerical work. So you may find on or both to be valuable assets.

Oh, right -- and did I mention they're both free?

Skepticism and the Self-Correcting Nature of Science

Monday, February 8, 2010 at 12:42 PM Bookmark and Share
Over at The Times online, there's a nice article on skepticism and science by John Krebs. You might want to jump right over and check it out, or if you prefer a sample before committing to that mouse click, here's how the piece begins...
My non-scientist friends are beginning to ask me “What’s gone wrong with science?” Revelations about melting glaciers and potentially dodgy emails about global warming, the resurfacing of Andrew Wakefield and the MMR scare, and the sacking of the Government’s drugs adviser, have created the impression for some people that science is in a mess.

Of course science isn’t in a mess, nor has anything changed. But the stories underline two important features of scientists and science. First, scientists, just like every other trade — bus drivers, lawyers and bricklayers — are a mix. Most are pretty average, a few are geniuses, some are a bit thick, and some dishonest.

Second, science itself is often misunderstood. Scientists tend to be portrayed as voices of authority who are able to reveal truths about arcane problems, be it the nature of quarks or the molecular basis of ageing. In fact, science is almost the opposite of this. In The Trouble With Physics, physicist Lee Smolin considers how to describe science and concludes that Nobel Prize winner Richard Feyman’s phrase says it best: “Science is the organised scepticism in the reliability of expert opinion.”  ...

[Hat tip to Dave Hone]

Kids Explain Evolution: The Charlie's Playhouse Compilation

Thursday, November 26, 2009 at 2:20 AM Bookmark and Share
A while ago, some of you may have seen requests for parents to share some video of their kids answering the question "What's Evolution?" The result is the video version of the Ask the Kids! project at Charlie's Playhouse which is now available on the web (including right down below...)


Ray Comfort's 194,000+ Copies of Darwin's Origin, Missing Chapters

Friday, October 30, 2009 at 8:30 PM Bookmark and Share
According to National Center for Science Education (NCSE) director Eugenie Scott, copies of the Christian fundamentalist version of Darwin's Origin of Species is missing 4 major chapters.  This, despite previous claims that it would be printed in full. Of the projected 250,000+ copies being printed, 100,000+ are slated for distribution to non-science majors and other students at top U.S. colleges and universities on the 19th of November, 2009.

This out of the first round of an online "debate" between Scott and the author of the the "unusual" edition of Darwin's book, Ray Comfort (you can read his defense of the book here).

From Ray Comfort's website [bold emphasis mine]:
In November of 2009, we will be giving away more than 100,000 copies of Charles Darwin's On Origin of Species [sic] at 100 top U.S. universities (other individuals and churches have purchased approximately 70,000 copies to also give to students). This will be the entire publication (304-pages). Nothing has been removed from Darwin’s original work. As usual with reprints of On Origin of Species (there have been over 140 reprints), there will be an Introduction. My name will be on the cover (for those who think that we are somehow being deceptive). In one day, 170,000 future doctors, lawyers and politicians will freely get information about Intelligent Design (and the gospel) placed directly into their hands!
...
Sincerely,
Ray Comfort
[Source]

I've posted previously about this subject, here, here, here and here and if this latest news is true, I think it may reveal much about Ray Comfort's intellect and integrity.  Taken at face value, it seems he is a deeply and willfully ignorant person when it comes to science - an interpretation consistent with his previous statements on the subject.  Secondly, he looks the part of a very dishonest individual who seems willing to (intentionally?) mislead his critics and America's youth in order to propagate his own particular variety of fundamentalist Christianity.

Understandably, Comfort has received a lot of heat for trying to evangelize to students under such false pretenses - and he seems to be feeling it.  From elsewhere on his website...
"From now on I will refuse to answer questions about the book or its contents," Comfort said, "because there is such a deep-rooted anger in the atheist world about this publication.

"They desperately want to stop us," he said, "and I don't want to give away any further details regarding the campaign."
...
Comfort argues the book has not been altered at all.

"The 304-page publication will be Charles Darwin's every word - not one jot nor tittle will be removed," he said. [Source]
Poor guy doesn't even understand why some find his actions so repugnant!  People just don't like dishonesty, and lately Ray seems to just wreak of the stuff.

So what should students do if they happen upon a copy Ray Comfort's "abridged" version of Darwin's On the Origin of Species this fall?  Dr. Scott has some advice...
But there's no reason for students to refuse Comfort's free—albeit suspiciously abridged—copy of the Origin. Read the first eight pages of the introduction, which is a reasonably accurate, if derivative, sketch of Darwin's life. The last 10 pages or so are devoted to some rather heavy-handed evangelism, which doesn't really have anything to do with the history or content of the evolutionary sciences; read it or not as you please.

But don't waste your time with the middle section of the introduction, a hopeless mess of long-ago-refuted creationist arguments, teeming with misinformation about the science of evolution, populated by legions of strawmen, and exhibiting what can be charitably described as muddled thinking.

For example, Comfort's treatment of the human fossil record is painfully superficial, out of date, and erroneous. Piltdown Man and Nebraska Man—one a forgery, the other a misidentification, both rejected by science more than 50 years ago—are trotted out for scorn, as if they somehow negate the remaining huge volume of human fossils. There are more specimens of "Ardi" (the newly described Ardipithecus ramidus) than there are of Tyrannosaurus —and any 8-year-old aspiring paleontologist will be delighted to tell you how much we know about the T. rex!
To that I'll add two parting points.  First, if you are so lucky as to pick up a copy (or twelve) of the book  - please remember that I'd love to have one! Second, the full text of Darwin's Origin is available free (on the web) from a variety of sources - doesn't the fact that Ray Comfort omitted those chapters make you wonder what parts he found so objectionable? ;)


Related Links:

  1. You Don’t Always Need to Be Fair and Balanced | Friendly Atheist
  2. Scott vs. Comfort | Pharyngula 
  3. Ray Comfort replies to Eugenie Scott | Pharyngula
    [Missing chapters going back in for second round of printing.]
  4. Scientist Genie Scott's Last Word to Creationist Ray Comfort: There You Go Again